BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H11LP1|AL429487
(1025 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1274 1963 0.0
>3x_Contig1274
Length = 5941
Score = 1963 bits (987), Expect = 0.0
Identities = 1020/1029 (99%), Gaps = 4/1029 (0%)
Strand = Plus / Minus
Query: 1 gatcttttggaaa-acgaccctgtgatgtactgtaatacatcgatcgtgtgtccgaacga 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2720 gatcttttggaaatacgaccctgtgatgtactgtaatacatcgatcgtgtgtccgaacga 2661
Query: 60 attcgatatcaaattcacaccgctctcgatgtcgtacaaatactccggcgatctcattgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 attcgatatcaaattcacaccgctctcgatgtcgtacaaatactccggcgatctcattgg 2601
Query: 120 acgttcatacccataccaaccaccgttgcccgatatctcgatggaattgatgtctccgat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 acgttcatacccataccaaccaccgttgcccgatatctcgatggaattgatgtctccgat 2541
Query: 180 acaaccttcgctgattaactctttggcccgaacgatgtatggcgatttacgtccttggag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2540 acaaccttcgctgattaactctttggcccgaacgatgtatggcgatttacgtccttggag 2481
Query: 240 acatatgatcgtttgtvaattggcacgctgctgagatatcgaatacaactcttctgcctg 299
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2480 acatatgatcgtttgtaaattggcacgctgctgagatatcgaatacaactcttctgcctg 2421
Query: 300 ttgtacgcttgcagcaagagcccattccacgtacaaataccttagattcaggttctggga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2420 ttgtacgcttgcagcaagagcccattccacgtacaaataccttagattcaggttctggga 2361
Query: 360 cgaatgttccaatatattcttgaccacctcgtaatgctctggcacttttacactaacaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2360 cgaatgttccaatatattcttgaccacctcgtaatgctctggcacttttacactaacaac 2301
Query: 420 gatcatatcgatatctttatactgagcaaaagattccaacgaatcaaaccctgtagcatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2300 gatcatatcgatatctttatactgagcaaaagattccaacgaatcaaaccctgtagcatg 2241
Query: 480 tttcaattgcaactgttcaatggtctgaagactcgatttcaaagtagggttgtacaaggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 tttcaattgcaactgttcaatggtctgaagactcgatttcaaagtagggttgtacaaggc 2181
Query: 540 cactatctggaactgtgaactgagctgctgtatggctaagaaatgcgtcttggcaaccca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2180 cactatctggaactgtgaactgagctgctgtatggctaagaaatgcgtcttggcaaccca 2121
Query: 600 acttttaccactggttaacccaacgaaaccaacacggatcggtctactcgatggcaccgt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 acttttaccactggttaacccaacgaaaccaacacggatcggtctactcgatggcaccgt 2061
Query: 660 ggataatttggaccgtttgttattgttcatgatgccgtyctgccgagatattgtgtacac 719
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2060 ggataatttggaccgtttgttattgttcatgatgccgtcctgccgagatattgtgtacac 2001
Query: 720 tggatcaaataataacactttcaaagtgactaaatcacaattgtcccaagatatactata 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2000 tggatcaaataataacactttcaaagtgactaaatcacaattgtcccaagatatactata 1941
Query: 780 gctctctgtttaacctttatattgtcaaaaagggacaatgaatgaaagtacaaacacaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 gctctctgtttaacctttatattgtcaaaaagggacaatgaatgaaagtacaaacacaaa 1881
Query: 840 cacaaacacaatggaagggagtgtccagggtggtgattcctgactgtwctgattcgacgg 899
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1880 cacaaacacaatggaagggagtgtccagggtggtgattcctgactgtactgattcgacgg 1821
Query: 900 agttttatttgatttcgttgaagtggttaaagtgaataattcttgaattgagaggracaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1820 agttttatttgatttcgttgaagtggttaaagtgaataattcttgaattgagaggaacaa 1761
Query: 960 agagtggat-aaataacggaatggagaggt-cgagcgatgawtaatgtacgattcgg-ag 1016
||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 1760 agagtggataaaataacggaatggagaggtccgagcgatgaataatgtacgattcggaag 1701
Query: 1017 actatgagc 1025
|||||||||
Sbjct: 1700 actatgagc 1692
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6248
Number of Sequences: 1807
Number of extensions: 6248
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1025
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1009
effective length of database: 10,329,639
effective search space: 10422605751
effective search space used: 10422605751
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)